Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019068.1 Corchorus olitorius cultivar O-4 contig19101, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  28226

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11--69
18
3.1
18
75
17
55
15
5
1
77
1.01
9--60
10
4.9
10
84
11
59
13
3
1
80
0.93
240--269
10
3.0
10
100
0
60
30
0
20
50
1.49
1287--1311
2
12.5
2
100
0
50
48
0
0
52
1.00
2343--2404
29
2.0
32
87
9
94
40
4
6
48
1.50
2343--2404
31
2.0
30
84
9
81
40
4
6
48
1.50
3465--3604
60
2.3
60
92
2
228
35
18
20
26
1.95
3644--3782
59
2.4
59
82
3
163
29
13
15
41
1.85
10867--10904
2
19.0
2
94
0
67
47
0
0
52
1.00
21823--21877
27
2.0
27
100
0
110
29
14
7
49
1.70
27314--28203
332
2.7
330
82
4
1033
37
16
14
32
1.88
27214--28226
331
3.0
328
79
7
1153
37
16
14
32
1.88

Tables:   1

The End!