Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019077.1 Corchorus olitorius cultivar O-4 contig19110, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11142

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
655--701
25
1.9
24
91
4
76
55
6
6
31
1.51
692--780
45
2.0
42
89
6
133
35
4
7
51
1.51
1521--1550
11
2.8
11
95
5
53
6
56
36
0
1.26
1680--1762
22
3.8
21
73
17
64
57
1
2
38
1.19
1682--1730
25
2.0
25
84
8
64
59
0
0
40
0.98
8319--11125
335
8.5
328
77
8
2384
36
16
13
33
1.88

Tables:   1

The End!