Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019079.1 Corchorus olitorius cultivar O-4 contig19112, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11648

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2109--2136
14
2.0
14
100
0
56
35
21
7
35
1.81
5957--6034
29
2.6
29
83
6
84
26
14
26
32
1.94
5930--6033
31
3.4
30
75
10
104
28
11
25
33
1.91
8149--8177
14
2.1
14
100
0
58
34
0
13
51
1.42
8419--8476
19
3.4
19
64
26
56
37
29
18
13
1.90
8414--8556
32
4.5
32
95
0
259
33
26
22
17
1.96
8954--9024
31
2.3
30
80
14
81
35
11
25
28
1.90
9488--9526
13
3.0
13
85
7
53
51
23
10
15
1.73
9477--9522
13
3.3
13
82
11
56
43
28
10
17
1.82
9697--9826
44
3.0
44
90
2
208
23
14
2
60
1.46

Tables:   1

The End!