Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019082.1 Corchorus olitorius cultivar O-4 contig19115, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21103

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
694--778
42
2.0
42
97
0
161
32
16
16
34
1.91
5895--6000
54
2.0
54
96
0
194
35
22
16
24
1.95
5967--6095
66
2.0
63
88
7
188
33
22
13
30
1.93
7179--7238
32
1.9
32
93
3
104
43
13
10
33
1.77
7938--8171
76
3.1
76
97
0
441
53
11
11
23
1.69
9132--9189
16
3.7
16
75
13
57
68
18
10
1
1.26
9129--9175
25
2.0
25
88
12
73
74
17
8
0
1.05
10461--10493
16
2.1
16
88
11
50
39
3
9
48
1.50
11360--11384
13
1.9
13
100
0
50
48
16
0
36
1.46
11571--11619
25
2.0
25
91
0
80
14
30
18
36
1.90

Tables:   1

The End!