Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019083.1 Corchorus olitorius cultivar O-4 contig19116, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8288

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
706--745
5
8.4
5
89
10
66
22
20
0
57
1.41
863--944
41
1.9
43
83
14
107
43
4
10
40
1.61
965--1002
15
2.4
17
83
16
55
39
0
2
57
1.12
1340--2043
335
2.1
332
83
5
866
34
14
14
36
1.87
1747--2337
294
2.0
294
79
5
633
32
15
14
36
1.89
2037--4071
336
6.2
328
76
8
1642
33
14
15
36
1.88
4317--4367
16
3.4
16
68
15
54
50
1
5
41
1.37
4305--4365
29
2.1
29
93
0
104
57
1
4
36
1.30
7015--7429
212
2.0
201
88
6
607
41
13
10
34
1.79
7928--8288
192
1.8
194
85
6
505
35
12
17
34
1.87

Tables:   1

The End!