Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019086.1 Corchorus olitorius cultivar O-4 contig19119, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14844

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
243--492
46
5.3
46
73
11
143
21
19
20
39
1.93
450--540
48
1.9
48
84
2
121
25
19
17
37
1.94
2155--2185
12
2.5
13
94
5
55
58
0
41
0
0.98
5580--5673
41
2.3
41
84
1
125
45
13
2
38
1.56
6625--6700
33
2.3
33
77
8
84
57
1
6
34
1.33
6638--6699
8
7.6
8
85
10
74
59
1
3
35
1.23
6652--6697
13
3.6
13
76
23
53
60
2
0
36
1.09

Tables:   1

The End!