Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019087.1 Corchorus olitorius cultivar O-4 contig19120, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12560

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3557--3605
24
2.0
24
100
0
98
20
38
16
24
1.92
5633--5700
32
2.2
31
87
7
95
50
11
17
20
1.77
5832--5910
31
2.5
31
87
0
113
36
17
11
34
1.86
6001--6033
16
2.1
16
88
11
50
51
0
0
48
1.00
6096--6129
16
2.1
16
100
0
68
47
0
17
35
1.48
6980--7060
31
2.6
31
90
0
126
38
9
16
35
1.81
7167--7234
31
2.3
31
89
5
104
20
16
11
51
1.75
7177--7242
29
2.2
31
86
5
91
22
18
13
45
1.84
10262--10302
19
2.2
19
86
0
55
14
17
21
46
1.84

Tables:   1

The End!