Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019092.1 Corchorus olitorius cultivar O-4 contig19125, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  40109

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
72--491
46
9.1
46
84
4
526
40
22
25
11
1.87
72--491
93
4.5
91
86
4
538
40
22
25
11
1.87
2627--2732
35
3.0
35
89
6
153
42
28
10
18
1.83
3989--4039
25
2.0
25
96
0
93
25
7
27
39
1.83
4203--4228
13
2.0
13
100
0
52
38
0
30
30
1.58
12121--12202
37
2.2
37
86
0
128
41
8
29
20
1.82
12716--12800
43
2.0
43
100
0
170
42
14
18
24
1.88
16268--16321
2
27.0
2
80
0
63
42
1
3
51
1.30
16268--16321
18
3.0
18
88
0
72
42
1
3
51
1.30

Tables:   1

The End!