Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019093.1 Corchorus olitorius cultivar O-4 contig19126, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18621

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3991--4026
15
2.4
16
90
9
58
0
8
36
55
1.30
6204--6251
24
2.0
25
83
4
62
70
6
6
16
1.28
14616--14661
24
1.9
24
95
0
83
34
30
2
32
1.70
14757--14783
12
2.2
12
100
0
54
59
14
0
25
1.36
16876--18524
334
4.9
330
74
11
1076
37
15
14
32
1.87
18541--18565
2
12.5
2
100
0
50
52
0
0
48
1.00

Tables:   1

The End!