Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019094.1 Corchorus olitorius cultivar O-4 contig19127, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13752

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1083--1117
18
1.9
18
88
0
52
28
25
17
28
1.97
1953--2001
24
2.0
25
84
7
66
20
4
16
59
1.53
5268--5330
29
2.2
28
91
5
108
50
0
3
46
1.17
5286--5336
10
5.2
10
81
13
54
50
0
5
43
1.26
5264--5320
2
30.0
2
84
10
75
50
0
1
47
1.11
6870--6921
4
13.0
4
87
0
68
53
3
0
42
1.19
6870--6908
16
2.4
16
100
0
78
56
0
0
43
0.99
8267--8363
31
3.1
31
61
16
74
26
14
12
46
1.80
8267--8390
62
2.0
62
95
3
223
29
14
12
44
1.81
9335--9378
21
2.2
20
83
4
52
56
4
6
31
1.46

Tables:   1

The End!