Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019103.1 Corchorus olitorius cultivar O-4 contig19136, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8358

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
57--99
16
2.8
15
82
3
59
6
13
41
37
1.72
718--2224
764
2.0
764
96
0
2802
31
15
14
38
1.87
7547--7613
26
2.5
27
90
2
100
34
7
17
40
1.78
7590--7671
43
1.9
43
84
0
110
34
6
21
37
1.79
7672--7747
7
10.9
7
98
0
143
15
0
26
57
1.38
7904--7981
33
2.4
33
91
0
120
32
6
17
43
1.75
8019--8351
55
6.0
55
81
9
185
34
21
16
27
1.95
8044--8352
54
5.6
54
83
8
336
34
22
15
27
1.94
8085--8352
114
2.4
108
86
6
367
35
22
15
27
1.94

Tables:   1

The End!