Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019112.1 Corchorus olitorius cultivar O-4 contig19145, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  40262

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
798--1061
134
2.0
128
85
5
350
32
18
5
43
1.73
1626--1656
15
2.1
15
100
0
62
32
0
6
61
1.21
10265--10522
107
2.5
106
89
3
380
42
9
8
39
1.68
10538--10574
15
2.5
15
84
16
51
81
0
5
13
0.86
31241--34886
330
11.2
330
79
6
3283
36
16
14
32
1.89
35300--35568
138
2.0
134
93
2
457
36
12
13
37
1.83
36184--36244
21
2.9
21
83
9
63
54
3
1
40
1.27
36360--36403
20
2.2
20
88
4
63
63
6
9
20
1.46

Tables:   1

The End!