Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019114.1 Corchorus olitorius cultivar O-4 contig19147, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10215

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5436--5476
18
2.3
18
87
8
57
4
21
21
51
1.67
5409--5599
47
4.1
46
83
5
222
6
24
20
48
1.74
5483--5523
18
2.3
17
87
8
55
4
26
21
46
1.72
5528--5572
18
2.4
19
81
7
56
4
24
20
51
1.66
5401--5599
95
2.1
92
83
6
249
6
25
20
48
1.73
8218--8247
15
1.9
16
93
6
53
43
0
3
53
1.17
8624--9967
336
4.0
333
82
6
1534
33
15
14
35
1.89
10144--10179
2
18.5
2
94
5
65
47
0
0
52
1.00

Tables:   1

The End!