Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019119.1 Corchorus olitorius cultivar O-4 contig19152, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  50171

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--37
2
18.5
2
100
0
74
48
0
0
51
1.00
1317--1475
87
1.8
87
93
0
273
39
11
10
38
1.75
1420--1538
59
2.0
59
98
0
229
41
9
10
39
1.71
2493--2560
29
2.4
29
82
2
84
33
11
10
44
1.75
3658--3761
52
2.0
52
98
0
199
35
15
22
26
1.94
3942--3976
17
2.0
17
88
5
52
22
0
8
68
1.16
8132--8158
12
2.2
12
100
0
54
22
7
37
33
1.82
11528--11578
22
2.2
24
83
16
72
41
0
0
58
0.98
11528--11576
25
2.0
25
84
8
64
40
0
0
59
0.98
13826--13882
11
4.8
12
74
22
50
43
21
17
17
1.88
19542--19579
19
2.0
19
94
0
67
42
23
10
23
1.85
20075--20105
16
1.9
16
100
0
62
35
0
12
51
1.40
40479--40550
29
2.4
30
77
13
76
27
26
15
30
1.96
40804--40924
31
4.0
30
79
12
122
33
12
23
29
1.92
40851--40924
29
2.5
31
86
6
107
32
12
25
29
1.92

Tables:   1

The End!