Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019122.1 Corchorus olitorius cultivar O-4 contig19155, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  64119

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
700--740
2
20.5
2
83
14
50
43
2
2
51
1.28
5906--5966
29
2.1
30
87
3
88
42
3
3
50
1.34
6881--7017
60
2.3
60
83
5
170
37
15
16
30
1.90
7058--7223
60
2.8
60
85
1
217
29
19
18
32
1.96
10882--11044
53
3.1
53
99
0
317
50
18
7
23
1.71
18920--19022
52
2.0
52
92
0
170
33
15
23
27
1.95
37823--37860
3
12.3
3
94
5
67
65
0
0
34
0.93
45756--45814
26
2.1
28
85
14
79
55
0
8
35
1.30
60303--60327
2
12.5
2
100
0
50
48
0
0
52
1.00
62904--62983
22
3.7
22
80
6
110
51
0
5
43
1.23
62904--62984
33
2.5
31
75
13
83
51
0
4
43
1.23
62904--62987
11
7.8
11
72
5
73
52
0
4
42
1.22

Tables:   1

The End!