Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019125.1 Corchorus olitorius cultivar O-4 contig19158, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11967

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1998--2031
15
2.3
15
94
0
59
41
0
58
0
0.98
1997--2031
12
2.9
12
95
0
61
42
0
57
0
0.99
3432--3535
33
3.2
33
74
8
115
28
24
24
23
1.99
3419--3510
30
3.0
30
76
7
112
28
23
23
23
2.00
4719--4746
2
14.0
2
100
0
56
50
0
0
50
1.00
7793--7818
13
2.0
13
100
0
52
30
7
23
38
1.83

Tables:   1

The End!