Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019127.1 Corchorus olitorius cultivar O-4 contig19160, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  29363

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2362--2395
17
2.0
17
100
0
68
29
29
5
35
1.81
4825--4863
19
2.1
19
95
0
69
28
10
10
51
1.68
5074--5121
6
7.7
6
82
17
62
4
12
2
81
0.93
5069--5127
20
3.1
19
83
11
68
6
11
5
76
1.14
17939--17980
21
2.0
21
100
0
84
47
19
9
23
1.78
19201--19231
2
15.5
2
100
0
62
48
0
0
51
1.00
29322--29358
2
19.0
2
94
5
67
48
0
0
51
1.00

Tables:   1

The End!