Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019131.1 Corchorus olitorius cultivar O-4 contig19164, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  72319

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1710--1745
17
2.1
17
100
0
72
22
11
19
47
1.80
3831--3865
16
2.1
18
89
10
56
8
28
8
54
1.60
9715--9763
24
2.0
24
100
0
98
24
14
32
28
1.94
32450--32495
2
23.0
2
100
0
92
50
0
0
50
1.00
36823--36853
15
2.1
15
100
0
62
29
12
12
45
1.80
51904--52062
61
2.6
61
98
0
309
33
9
18
37
1.83
54141--54179
14
2.9
13
80
3
51
53
2
2
41
1.28
54165--54423
127
2.0
127
85
8
346
50
2
10
36
1.49
54729--54788
29
2.1
29
100
0
120
38
16
3
41
1.65
58895--58945
24
2.1
24
100
0
102
41
25
3
29
1.73
58981--59106
64
2.0
64
90
3
200
33
19
13
33
1.91
72235--72306
35
2.1
35
94
0
126
61
11
19
8
1.54
72235--72302
33
2.0
34
91
5
111
60
11
19
8
1.57

Tables:   1

The End!