Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019146.1 Corchorus olitorius cultivar O-4 contig19179, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  52336

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4736--4808
24
3.0
24
79
0
92
20
15
32
31
1.93
5220--5320
29
3.6
29
81
4
116
17
27
26
27
1.98
5183--5530
27
12.9
27
74
8
201
21
27
26
24
2.00
5351--5534
54
3.5
53
86
3
244
21
26
28
23
1.99
8380--8409
13
2.4
12
94
5
51
46
0
0
53
1.00
27695--27749
26
2.1
26
93
0
92
12
16
25
45
1.83
30483--30524
15
2.7
15
92
3
66
64
14
9
11
1.50
31283--31308
11
2.4
11
100
0
52
69
7
15
7
1.35
44036--44431
54
7.4
54
91
1
575
45
6
21
25
1.76
50165--50203
17
2.3
17
86
0
51
15
0
5
79
0.90

Tables:   1

The End!