Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019150.1 Corchorus olitorius cultivar O-4 contig19183, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13887

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
806--916
32
3.6
31
72
12
120
32
20
19
27
1.97
953--1121
31
5.6
29
70
16
130
26
18
20
34
1.96
983--1086
29
3.5
29
71
14
104
27
19
18
34
1.95
954--1117
60
2.7
60
89
3
267
26
18
20
34
1.96
1494--1535
22
1.9
22
81
18
52
9
7
23
59
1.53
6676--6723
22
2.1
22
85
14
62
12
6
4
77
1.11
9731--9824
45
2.2
44
87
11
133
39
21
3
36
1.69

Tables:   1

The End!