Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019152.1 Corchorus olitorius cultivar O-4 contig19185, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  30464

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
21--75
22
2.5
21
82
5
65
36
12
10
40
1.79
2539--2589
24
2.1
25
85
3
68
17
7
3
70
1.27
4037--4434
206
1.9
205
95
2
719
43
8
10
36
1.70
4541--4624
42
2.0
40
93
4
141
36
3
8
51
1.50
8368--8420
27
2.0
27
85
7
72
41
0
3
54
1.18
8379--8417
20
2.0
20
94
0
69
38
0
5
56
1.22
12676--12723
18
2.6
19
83
9
64
31
20
10
37
1.87
21046--21071
11
2.4
11
100
0
52
61
11
11
15
1.57
21219--21262
23
1.9
23
81
9
54
47
15
6
29
1.72
24020--24048
15
1.9
15
100
0
58
86
0
13
0
0.58
27869--27894
12
2.2
12
100
0
52
50
26
0
23
1.50
29354--29413
31
1.9
32
89
3
95
25
16
5
53
1.63
30360--30416
25
2.4
24
88
5
80
31
5
3
59
1.36

Tables:   1

The End!