Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019158.1 Corchorus olitorius cultivar O-4 contig19191, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10562

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6064--6170
44
2.4
44
81
3
117
42
10
10
36
1.73
6064--6294
22
10.4
22
69
12
105
36
13
9
40
1.76
7092--7177
43
1.9
44
88
6
129
44
1
6
47
1.37
7326--7400
22
3.4
22
75
10
73
37
9
9
44
1.69
7421--7478
23
2.5
23
100
0
116
41
12
5
41
1.64
7400--7506
23
4.9
21
83
7
81
37
14
7
40
1.75
9102--9131
10
2.9
10
95
5
51
50
0
16
33
1.46
9157--9183
12
2.2
12
100
0
54
14
14
7
62
1.51
9260--9296
18
2.1
18
89
0
56
24
10
5
59
1.52

Tables:   1

The End!