Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019164.1 Corchorus olitorius cultivar O-4 contig19197, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19134

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1131--1173
20
2.2
20
86
0
59
13
23
18
44
1.86
3196--3251
29
1.9
29
96
0
103
33
7
25
33
1.83
10966--11018
24
2.2
24
82
0
70
47
0
0
52
1.00
11006--11058
2
27.0
2
77
11
56
41
1
1
54
1.22
11006--11058
20
2.9
18
86
10
72
41
1
1
54
1.22
15938--16005
35
1.9
35
84
0
91
23
1
33
41
1.64
16917--16976
20
2.8
22
82
10
70
45
10
11
33
1.74
16956--17060
44
2.4
43
80
9
117
39
6
11
42
1.67
17003--17056
21
2.6
21
84
0
72
40
5
9
44
1.60

Tables:   1

The End!