Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019166.1 Corchorus olitorius cultivar O-4 contig19199, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4705

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2216--2260
6
7.5
6
89
0
63
33
13
0
53
1.40
2207--2256
15
3.5
15
81
15
70
34
12
0
54
1.38
2770--2829
26
2.3
26
97
0
111
53
13
3
30
1.56
3481--3547
23
3.0
22
82
6
73
38
19
11
29
1.88
3377--3547
22
7.7
22
73
8
132
39
17
11
31
1.85
3576--3652
22
3.5
23
80
8
72
33
19
6
40
1.77
3679--3761
22
3.8
22
76
12
80
34
10
14
39
1.81
3682--3802
44
2.8
44
83
0
143
33
11
14
40
1.81
4567--4704
5
26.8
5
98
1
240
0
0
18
81
0.70

Tables:   1

The End!