Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019173.1 Corchorus olitorius cultivar O-4 contig19206, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11681

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8546--8949
35
11.3
35
80
7
431
19
21
18
40
1.92
8546--8949
71
5.7
70
80
9
406
19
21
18
40
1.92
8550--8949
106
3.7
105
81
8
432
19
22
19
40
1.92
8546--8933
141
2.7
142
83
6
482
19
22
18
39
1.92
9253--9613
169
2.1
169
94
0
623
29
20
16
33
1.95
9548--9619
22
3.2
22
66
22
60
33
22
16
27
1.95
9890--10577
30
23.6
30
82
7
643
20
14
18
46
1.84
10498--10576
25
3.0
25
85
10
104
20
13
20
45
1.85
11083--11179
27
3.6
27
85
1
124
15
15
27
41
1.87

Tables:   1

The End!