Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019176.1 Corchorus olitorius cultivar O-4 contig19209, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13271

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2663--2710
24
2.0
24
95
0
87
8
39
25
27
1.84
5133--5176
15
2.9
14
86
10
52
11
9
15
63
1.51
5259--5344
43
2.0
43
97
0
163
25
9
17
47
1.77
5270--5341
22
3.3
22
77
11
94
25
9
18
47
1.78
9781--9902
39
3.0
40
92
7
212
65
2
15
16
1.38
10106--10141
2
18.5
2
88
5
56
47
2
0
50
1.15
10105--10139
17
2.1
17
94
0
61
45
2
0
51
1.16
10106--10142
19
1.9
19
94
0
65
45
2
0
51
1.15

Tables:   1

The End!