Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01001918.1 Corchorus olitorius cultivar O-4 contig01918, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8975

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2132--2188
28
2.0
29
83
13
73
35
17
28
19
1.94
4163--4212
17
2.9
16
80
11
55
24
22
18
36
1.95
4170--4220
17
3.1
16
80
8
57
23
21
19
35
1.96
4519--4576
21
2.7
21
81
5
62
34
17
3
44
1.65
8263--8327
20
3.2
20
70
12
69
26
4
9
60
1.47
8469--8566
51
1.9
51
97
0
187
18
33
22
25
1.96

Tables:   1

The End!