Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019186.1 Corchorus olitorius cultivar O-4 contig19219, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  71645

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1937--1970
12
2.9
12
86
4
52
70
5
0
23
1.09
2193--2217
7
3.6
7
100
0
50
16
16
24
44
1.86
13415--14430
438
2.3
436
84
4
1302
30
14
12
42
1.83
17004--17122
40
3.1
40
66
28
112
38
11
9
40
1.74
16995--17145
75
2.0
74
94
1
266
39
11
9
39
1.74
17023--17148
35
3.5
34
67
25
87
41
14
7
36
1.75
17479--17785
134
2.3
133
83
3
370
35
9
12
42
1.76
18506--18572
33
2.1
33
88
2
100
40
7
19
32
1.79
20157--20420
75
3.6
74
85
6
317
30
17
20
31
1.95
55662--55688
3
9.0
3
100
0
54
66
0
33
0
0.92
66414--66463
25
2.0
25
100
0
100
32
16
8
44
1.76

Tables:   1

The End!