Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019188.1 Corchorus olitorius cultivar O-4 contig19221, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24562

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5--814
332
2.4
331
86
1
1097
37
16
13
32
1.88
1149--1212
27
2.4
27
100
0
128
35
12
12
39
1.81
2985--3146
60
2.7
58
82
11
202
35
15
17
30
1.91
2981--3145
31
5.5
29
71
16
106
35
15
18
31
1.91
3190--3350
60
2.7
59
83
5
207
29
18
14
36
1.91
6630--6695
35
1.9
34
90
3
105
62
10
3
24
1.42
12182--12274
47
2.0
47
97
2
179
43
7
17
32
1.77
14783--14832
20
2.4
22
80
9
61
40
4
8
48
1.51
15380--15532
80
1.9
79
93
1
261
23
32
11
32
1.90
17811--18426
325
1.9
326
82
6
766
38
14
15
31
1.87
18941--21123
647
3.3
644
78
9
2059
36
15
14
34
1.88
22529--22642
40
2.7
42
78
9
108
37
7
13
42
1.71
23811--23927
58
2.0
58
98
0
225
46
15
23
15
1.83

Tables:   1

The End!