Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019190.1 Corchorus olitorius cultivar O-4 contig19223, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  59612

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7483--7551
34
2.2
34
75
12
76
39
4
2
53
1.36
8298--8332
16
2.1
17
89
5
54
42
0
2
54
1.15
10406--10438
16
2.1
16
100
0
66
15
24
18
42
1.88
37607--37665
30
2.0
30
93
0
100
28
20
3
47
1.66
43942--44069
65
2.0
66
95
1
231
43
7
19
28
1.79
55074--55199
41
3.0
41
64
13
103
46
6
10
37
1.64
55073--55367
143
2.0
145
89
9
447
46
6
9
36
1.63
55228--55381
74
2.0
77
88
7
233
48
7
9
35
1.64
55483--55507
13
1.9
13
100
0
50
8
16
12
64
1.49
56327--56353
14
1.9
14
100
0
54
44
11
0
44
1.39
56543--56614
32
2.2
32
82
0
90
22
13
16
47
1.82
58025--59612
333
4.7
331
85
4
2017
37
17
14
30
1.90

Tables:   1

The End!