Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: AWUE01019191.1 Corchorus olitorius cultivar O-4 contig19224, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 5784
ACGTcount: A:0.34, C:0.16, G:0.16, T:0.35
Warning! 1 characters in sequence are not A, C, G, or T
Found at i:1363 original size:665 final size:662
Alignment explanation
Indices: 18--1406 Score: 2087
Period size: 665 Copynumber: 2.1 Consensus size: 662
8 CTAATATGGG
* * * * * **
18 TAAGATTTGGTTAGATGGATATAGATATTTCAATGAGACTTGGCGCCAAAAATTGTGCAAAACTG
1 TAAGATTTGGTTAGATGAATAAAGATATTTCAAGGAGTCTTGGCACCAAAAATCATGCAAAACTG
* * * * *
83 AGCTGGGGCTCCAAATAGCGTTTTTAGTCAAAACCATGATGGTCAGTACACGTATTTACCTAAAA
66 AGCCGCGGCTCCAAATAGCGTTTTTAGTAAAAACCATGATGGTCAGTACACGGATTTAACTAAAA
* * * * * *
148 TTTTGACAAAATACGAACCCGAGAATTTCTCCTCATTTTCAGGCCACTATAGTTCATAAAAATNT
131 TTTTGACAAAATACGAACCCAAAAATTTCTCCTCATTTTCAGGCCACAATAGCTCACAAAAATAT
* ** ** *
213 TTAATTCAACGCCAAAAAAATTGAAGGGCTTATCACGTTTCTAATATTGTTTTTCTTATTTTTCT
196 ATAATTCAACGCCAAAAAAATTGAAGGGCTTATCACGTTTCTAATATCATTTTTCAAATTTTTCC
*
278 GAATTAATTTCTAACTAAATCGAAACATGATTCAGATGCTCATAAAATAAATCCTTAAATCCATT
261 AAATTAATTTCTAACTAAATCGAAACATGATTCAGATGCTCATAAAATAAATCCTTAAATCCATT
* *
343 GCGGCTGAGATTTAGTTAGATGAATAAAGATATTTCAAGGAGTCTTTGCACCTAAAATCATGCAA
326 GCGGCTGAGATTTAGTTAGATGAATAAAGATATTTCAAGGAGTCTTGGCACCAAAAATCATGCAA
* * * *
408 AACTGAGGCAGGTCCCATAGCGCATTTTTAGCCAAAAATTATGATGGTTAGTACACGATTTCGGC
391 AACTGAGCCAGGCCCCATAGCGCATTTTCAGCCAAAAATCATGATGGTTAGTACACGATTTCGGC
* *
473 TAAAATTTTTGAAAAAACTGACCCGAAAATTTTTTCCTCTAGTTTTTGTCACAATACTCACAAAA
456 TAAAATTTTTGAAAAAACTGACCCGAAAATTTTTTCCTCCAGTTTTTGCCACAATACTCACAAAA
*
538 AATATATAATTCAATGCCAAAAAGATTGAAGGGCTTTTCACGCTTCTAATATTGTTTTTCAAAAT
521 AATATATAATTCAATGCCAAAAAGATTGAAGGGCTTTTCACGCTTCTAATATCGTTTTTCAAAAT
*
603 TTTTCCAAATTAATTTCTAACTAAATCGAAACATGATTCAGATGCTCGCAAAAACAATTCCTTAA
586 TTTTCCAAATTAATTTCTAACTAAATCGAAACATGATTCAGATGCTCGCAAAAACAAATCCTTAA
*
668 ATCCATTGCGGC
651 ACCCATTGCGGC
*
680 TGAGATTTGGTTAGATGAATAAAGATATTTCAAGGAGTCTTGGCACCAAAAATCATGCAAAACTG
1 TAAGATTTGGTTAGATGAATAAAGATATTTCAAGGAGTCTTGGCACCAAAAATCATGCAAAACTG
* * * *
745 AGCCGCGGC-CC-TATAGCGCATTTTTAGGTAAAAATCATGATGGTTAGTAGA-GGATTTCAACT
66 AGCCGCGGCTCCAAATAGCG--TTTTTA-GTAAAAACCATGATGGTCAGTACACGGATTT-AACT
* * * * *
807 AAGATTTTTGA-AGAA-ACTG-ACCCAAAACATTTTTCCTCGATTTT-TGGCCACAATA-CTGAC
127 AA-AATTTTGACAAAATAC-GAACCCAAAA-ATTTCTCCTC-ATTTTCAGGCCACAATAGCTCAC
* * * * *
867 AAAAATATATAATTCAACGTCAAAAATATTGAAGGGTTTTTCAGGTTTCTAATATCATTTTTCGA
188 AAAAATATATAATTCAACGCCAAAAAAATTGAAGGGCTTATCACGTTTCTAATATCATTTTTC-A
932 AATTTTTCCAAATTAATTTCTAACTAAATCGAAACATGATTCAGATGCTCGCA-AAAATAAATCC
252 AATTTTTCCAAATTAATTTCTAACTAAATCGAAACATGATTCAGATGCT--CATAAAATAAATCC
*
996 TTAAATCCATTGCGGCTGAGATTTGGTTAGATGAATAAAGATATTTCAAGGAGTCTTGGCACCAA
315 TTAAATCCATTGCGGCTGAGATTTAGTTAGATGAATAAAGATATTTCAAGGAGTCTTGGCACCAA
*
1061 AAATCATGCAAAACTGAGCCGGGGCCCCATAGCGCATTTTCAGCCAAAAATCATGATGGTTAGTA
380 AAATCATGCAAAACTGAGCC-AGGCCCCATAGCGCATTTTCAGCCAAAAATCATGATGGTTAGTA
*
1126 CACGATTTCGGCTAAAATTTTTGAAAAAACTGACCCGAAAA-TTTTTCCTCCATTTTTTGCCACA
444 CACGATTTCGGCTAAAATTTTTGAAAAAACTGACCCGAAAATTTTTTCCTCCAGTTTTTGCCACA
*
1190 ATACTCACAAAAAATATATAATTCAATGCCAAAAAGATTGAAGGGTTTTTCACGCTTCTAATATC
509 ATACTCACAAAAAATATATAATTCAATGCCAAAAAGATTGAAGGGCTTTTCACGCTTCTAATATC
1255 GTTTTTCAAAATTTTTTCCAAATTAATTTCTAACTAAATCGAAACATGATTCAGATGCTCGCAAA
574 GTTTTTCAAAA-TTTTTCCAAATTAATTTCTAACTAAATCGAAACATGATTCAGATGCTCGCAAA
1320 AACAAATCCTTAAACCCATTGCGGC
638 AACAAATCCTTAAACCCATTGCGGC
*
1345 TAAGATTTGGTTAGATGAATAAAGATATTTCAAGGAGTCTTGGCACCAAAAATCAAGCAAAA
1 TAAGATTTGGTTAGATGAATAAAGATATTTCAAGGAGTCTTGGCACCAAAAATCATGCAAAA
1407 GTAAGCCGGG
Statistics
Matches: 657, Mismatches: 57, Indels: 23
0.89 0.08 0.03
Matches are distributed among these distances:
660 6 0.01
661 2 0.00
662 139 0.21
663 93 0.14
664 198 0.30
665 219 0.33
ACGTcount: A:0.36, C:0.17, G:0.15, T:0.32
Consensus pattern (662 bp):
TAAGATTTGGTTAGATGAATAAAGATATTTCAAGGAGTCTTGGCACCAAAAATCATGCAAAACTG
AGCCGCGGCTCCAAATAGCGTTTTTAGTAAAAACCATGATGGTCAGTACACGGATTTAACTAAAA
TTTTGACAAAATACGAACCCAAAAATTTCTCCTCATTTTCAGGCCACAATAGCTCACAAAAATAT
ATAATTCAACGCCAAAAAAATTGAAGGGCTTATCACGTTTCTAATATCATTTTTCAAATTTTTCC
AAATTAATTTCTAACTAAATCGAAACATGATTCAGATGCTCATAAAATAAATCCTTAAATCCATT
GCGGCTGAGATTTAGTTAGATGAATAAAGATATTTCAAGGAGTCTTGGCACCAAAAATCATGCAA
AACTGAGCCAGGCCCCATAGCGCATTTTCAGCCAAAAATCATGATGGTTAGTACACGATTTCGGC
TAAAATTTTTGAAAAAACTGACCCGAAAATTTTTTCCTCCAGTTTTTGCCACAATACTCACAAAA
AATATATAATTCAATGCCAAAAAGATTGAAGGGCTTTTCACGCTTCTAATATCGTTTTTCAAAAT
TTTTCCAAATTAATTTCTAACTAAATCGAAACATGATTCAGATGCTCGCAAAAACAAATCCTTAA
ACCCATTGCGGC
Found at i:1416 original size:333 final size:332
Alignment explanation
Indices: 20--1443 Score: 1933
Period size: 332 Copynumber: 4.3 Consensus size: 332
10 AATATGGGTA
* * * * * **
20 AGATTTGGTTAGATGGATATAGATATTTCAATGAGACTTGGCGCCAAAAATTGTGCAAAACTGAG
1 AGATTTGGTTAGATGAATAAAGATATTTCAAGGAGTCTTGGCACCAAAAATCATGCAAAACTGAG
* * * * *
85 CTGGGGCTCCAAATAGCG--TTTTTAGTC-AAAACCATGATGGTCAGTACACGTATTTAC--CTA
66 CCGGGGC-CC-CATAGCGCATTTTTAGCCAAAAATCATGATGGTTAGTACACG-ATTT-CGGCTA
* * * * * *
145 AAA-TTTTGACAAAATAC-GAACCCGAGAATTTCTCCT-CATTTTCAGGCCACTATAGTTCA-TA
127 AAATTTTTGA-AAAA-ACTG-ACCCGAAAATTTTTCCTCCATTTT-TGGCCACAATA-CTCACAA
* * * * * * **
206 AAAATNTTTAATTCAACGCCAAAAAAATTGAAGGGCTTATCACGTTTCTAATATTGTTTTTC-TT
187 AAAATATATAATTCAACGCCAAAAAGATTGAAGGGCTTTTCACGCTTCTAATATCGTTTTTCAAA
** *
270 ATTTTTCTGAATTAATTTCTAACTAAATCGAAACATGATTCAGATGCT--CATAAAATAAATCCT
252 ATTTTTCCAAATTAATTTCTAACTAAATCGAAACATGATTCAGATGCTCGCA-AAAACAAATCCT
333 TAAATCCATTGCGGCTG
316 TAAATCCATTGCGGCTG
* * *
350 AGATTTAGTTAGATGAATAAAGATATTTCAAGGAGTCTTTGCACCTAAAATCATGCAAAACTGAG
1 AGATTTGGTTAGATGAATAAAGATATTTCAAGGAGTCTTGGCACCAAAAATCATGCAAAACTGAG
* * * *
415 GC-AGGTCCCATAGCGCATTTTTAGCCAAAAATTATGATGGTTAGTACACGATTTCGGCTAAAAT
66 CCGGGGCCCCATAGCGCATTTTTAGCCAAAAATCATGATGGTTAGTACACGATTTCGGCTAAAAT
* *
479 TTTTGAAAAAACTGACCCGAAAATTTTTTCCTCTAGTTTTT-GTCACAATACTCACAAAAAATAT
131 TTTTGAAAAAACTGACCCGAAAA-TTTTTCCTCCA-TTTTTGGCCACAATACTCACAAAAAATAT
* *
543 ATAATTCAATGCCAAAAAGATTGAAGGGCTTTTCACGCTTCTAATATTGTTTTTCAAAATTTTTC
194 ATAATTCAACGCCAAAAAGATTGAAGGGCTTTTCACGCTTCTAATATCGTTTTTCAAAATTTTTC
*
608 CAAATTAATTTCTAACTAAATCGAAACATGATTCAGATGCTCGCAAAAACAATTCCTTAAATCCA
259 CAAATTAATTTCTAACTAAATCGAAACATGATTCAGATGCTCGCAAAAACAAATCCTTAAATCCA
673 TTGCGGCTG
324 TTGCGGCTG
682 AGATTTGGTTAGATGAATAAAGATATTTCAAGGAGTCTTGGCACCAAAAATCATGCAAAACTGAG
1 AGATTTGGTTAGATGAATAAAGATATTTCAAGGAGTCTTGGCACCAAAAATCATGCAAAACTGAG
* * ** * * ** *
747 CCGCGGCCCTATAGCGCATTTTTAGGTAAAAATCATGATGGTTAGTAGAGGATTTCAACTAAGAT
66 CCGGGGCCCCATAGCGCATTTTTAGCCAAAAATCATGATGGTTAGTACACGATTTCGGCTAAAAT
* * * *
812 TTTTGAAGAAACTGACCCAAAACATTTTTCCTCGATTTTTGGCCACAATACTGAC-AAAAATATA
131 TTTTGAAAAAACTGACCCGAAA-ATTTTTCCTCCATTTTTGGCCACAATACTCACAAAAAATATA
* * * * * * *
876 TAATTCAACGTCAAAAATATTGAAGGGTTTTTCAGGTTTCTAATATCATTTTTCGAAATTTTTCC
195 TAATTCAACGCCAAAAAGATTGAAGGGCTTTTCACGCTTCTAATATCGTTTTTCAAAATTTTTCC
*
941 AAATTAATTTCTAACTAAATCGAAACATGATTCAGATGCTCGCAAAAATAAATCCTTAAATCCAT
260 AAATTAATTTCTAACTAAATCGAAACATGATTCAGATGCTCGCAAAAACAAATCCTTAAATCCAT
1006 TGCGGCTG
325 TGCGGCTG
1014 AGATTTGGTTAGATGAATAAAGATATTTCAAGGAGTCTTGGCACCAAAAATCATGCAAAACTGAG
1 AGATTTGGTTAGATGAATAAAGATATTTCAAGGAGTCTTGGCACCAAAAATCATGCAAAACTGAG
*
1079 CCGGGGCCCCATAGCGCATTTTCAGCCAAAAATCATGATGGTTAGTACACGATTTCGGCTAAAAT
66 CCGGGGCCCCATAGCGCATTTTTAGCCAAAAATCATGATGGTTAGTACACGATTTCGGCTAAAAT
*
1144 TTTTGAAAAAACTGACCCGAAAATTTTTCCTCCATTTTTTGCCACAATACTCACAAAAAATATAT
131 TTTTGAAAAAACTGACCCGAAAATTTTTCCTCCATTTTTGGCCACAATACTCACAAAAAATATAT
* *
1209 AATTCAATGCCAAAAAGATTGAAGGGTTTTTCACGCTTCTAATATCGTTTTTCAAAATTTTTTCC
196 AATTCAACGCCAAAAAGATTGAAGGGCTTTTCACGCTTCTAATATCGTTTTTCAAAA-TTTTTCC
*
1274 AAATTAATTTCTAACTAAATCGAAACATGATTCAGATGCTCGCAAAAACAAATCCTTAAACCCAT
260 AAATTAATTTCTAACTAAATCGAAACATGATTCAGATGCTCGCAAAAACAAATCCTTAAATCCAT
*
1339 TGCGGCTA
325 TGCGGCTG
* * *
1347 AGATTTGGTTAGATGAATAAAGATATTTCAAGGAGTCTTGGCACCAAAAATCAAGCAAAAGTAAG
1 AGATTTGGTTAGATGAATAAAGATATTTCAAGGAGTCTTGGCACCAAAAATCATGCAAAACTGAG
** * * *
1412 CCGGGATCCGAGAACGCATTTTTAGCCAAAAA
66 CCGGGGCCCCATAGCGCATTTTTAGCCAAAAA
1444 CCATTAATGT
Statistics
Matches: 971, Mismatches: 104, Indels: 35
0.87 0.09 0.03
Matches are distributed among these distances:
327 6 0.01
328 3 0.00
329 27 0.03
330 157 0.16
331 82 0.08
332 435 0.45
333 260 0.27
334 1 0.00
ACGTcount: A:0.36, C:0.18, G:0.15, T:0.31
Consensus pattern (332 bp):
AGATTTGGTTAGATGAATAAAGATATTTCAAGGAGTCTTGGCACCAAAAATCATGCAAAACTGAG
CCGGGGCCCCATAGCGCATTTTTAGCCAAAAATCATGATGGTTAGTACACGATTTCGGCTAAAAT
TTTTGAAAAAACTGACCCGAAAATTTTTCCTCCATTTTTGGCCACAATACTCACAAAAAATATAT
AATTCAACGCCAAAAAGATTGAAGGGCTTTTCACGCTTCTAATATCGTTTTTCAAAATTTTTCCA
AATTAATTTCTAACTAAATCGAAACATGATTCAGATGCTCGCAAAAACAAATCCTTAAATCCATT
GCGGCTG
Found at i:1511 original size:23 final size:23
Alignment explanation
Indices: 1475--1529 Score: 103
Period size: 22 Copynumber: 2.4 Consensus size: 23
1465 GGCTTCGGCT
1475 AAAATTTTTGAAAAAACTGA-CC
1 AAAATTTTTGAAAAAACTGACCC
1497 AAAATTTTTGAAAAAACTGACCC
1 AAAATTTTTGAAAAAACTGACCC
1520 AAAATTTTTG
1 AAAATTTTTG
1530 CCACAATACT
Statistics
Matches: 32, Mismatches: 0, Indels: 1
0.97 0.00 0.03
Matches are distributed among these distances:
22 20 0.62
23 12 0.38
ACGTcount: A:0.47, C:0.13, G:0.09, T:0.31
Consensus pattern (23 bp):
AAAATTTTTGAAAAAACTGACCC
Found at i:2100 original size:333 final size:331
Alignment explanation
Indices: 1542--2350 Score: 1338
Period size: 333 Copynumber: 2.4 Consensus size: 331
1532 ACAATACTCA
1542 CAAAAATCATGATGGTTAGTACACGATTTCGGCTAAAATTTTTGAAAAAACTGACCCGAAAATTT
1 CAAAAATCATGATGG-TAGTACACGATTTCGGCTAAAATTTTTGAAAAAACTGACCCGAAAA-TT
*
1607 TTTACTCAATTTTTTGCCACAATACTCATAAAAAATTATATAATTCAATGCTAAAATAATTGAAG
64 TTTACTCAATTTTTTGCCACAATACTCATAAAAAATTATATAATTCAATGCCAAAAT-ATTGAAG
1672 GGTTTTCACGCTTCTAATATCGTCTTTCAAAATTTTTTCCAAATTAATTTCTAACTAAATCGAAA
128 GGTTTTCACGCTTCTAATATCGTCTTTCAAAATTTTTTCCAAATTAATTTCTAACTAAATCGAAA
1737 CATGATTCGGATGCTCGCAAAAACAATTCCTTAAATCCATTGCGGCTGAGATTTGGTTAATTAAA
193 CATGATTCGGATGCTCGCAAAAACAATTCCTTAAATCCATTGCGGCTGAGATTTGGTTAATTAAA
* * *
1802 TAAAGATATTTCAAGAAGTCTTGGCACCAAAAATCATGCAAAACTGAACCGGGGCCCCCTAGCGT
258 TAAAGATATATCAAGAAGTCTTGGCACCAAAAATCATGCAAAACTGAACCGGGGCCCCATAGCGC
*
1867 ATTTTTAGC
323 ATTTTCAGC
* * * *
1876 GAAATATCATGATGGTAGTACACGATTTTGGCTAAAATTTTTGAAAAAACTGACCCGAAAGTATT
1 CAAAAATCATGATGGTAGTACACGATTTCGGCTAAAATTTTTGAAAAAACTGACCCGAAAAT-TT
1941 TTACTCAATTTTTTGCCACAATACTCATAAAAAATTATATAATTCAATGCCAAAATGATTGAAGG
65 TTACTCAATTTTTTGCCACAATACTCATAAAAAATTATATAATTCAATGCCAAAAT-ATTGAAGG
*
2006 GTTTTCACGCTTCTAATATCGTGTTTCAAAATTTTTTCCAAATTAATTTCTAACTAAATCGAAAC
129 GTTTTCACGCTTCTAATATCGTCTTTCAAAATTTTTTCCAAATTAATTTCTAACTAAATCGAAAC
*
2071 ATGATTCGGATGCTCGCAAAAACAATTCCTTAAATCCATTGCGGCTGAGATTTGGTTAATTGAAT
194 ATGATTCGGATGCTCGCAAAAACAATTCCTTAAATCCATTGCGGCTGAGATTTGGTTAATTAAAT
* *
2136 AAAGATATATCAAGGAGTCTTGGCACCAAAAATCATGCAAAACTGAGCCGGGGCCCCATAGCGCA
259 AAAGATATATCAAGAAGTCTTGGCACCAAAAATCATGCAAAACTGAACCGGGGCCCCATAGCGCA
2201 TTTTCAGC
324 TTTTCAGC
*
2209 CAAAAATCATGAT--AACGTACACGATTTCGGCTAAAATTTTTGAAAAAAACTGACCCGAAAATT
1 CAAAAATCATGATGGTA-GTACACGATTTCGGCTAAAATTTTTG-AAAAAACTGACCCGAAAATT
* * *
2272 CTTTCCTCCATTTTTTGCCACAATACTCA-CAAAAA-TATATAATTCAATGCCAAAAATATTGAA
64 -TTTACTCAATTTTTTGCCACAATACTCATAAAAAATTATATAATTCAATGCC-AAAATATTGAA
*
2335 GGGCTTTTTACGCTTC
127 GGG-TTTTCACGCTTC
2351 AAAAAAACTT
Statistics
Matches: 446, Mismatches: 23, Indels: 14
0.92 0.05 0.03
Matches are distributed among these distances:
331 26 0.06
332 48 0.11
333 359 0.80
334 13 0.03
ACGTcount: A:0.36, C:0.18, G:0.14, T:0.32
Consensus pattern (331 bp):
CAAAAATCATGATGGTAGTACACGATTTCGGCTAAAATTTTTGAAAAAACTGACCCGAAAATTTT
TACTCAATTTTTTGCCACAATACTCATAAAAAATTATATAATTCAATGCCAAAATATTGAAGGGT
TTTCACGCTTCTAATATCGTCTTTCAAAATTTTTTCCAAATTAATTTCTAACTAAATCGAAACAT
GATTCGGATGCTCGCAAAAACAATTCCTTAAATCCATTGCGGCTGAGATTTGGTTAATTAAATAA
AGATATATCAAGAAGTCTTGGCACCAAAAATCATGCAAAACTGAACCGGGGCCCCATAGCGCATT
TTCAGC
Found at i:5261 original size:77 final size:77
Alignment explanation
Indices: 5129--5284 Score: 285
Period size: 77 Copynumber: 2.0 Consensus size: 77
5119 AAAATCTACT
* *
5129 ATTGGCATGCTCCGCTACTGCCCACAGGAGTGCCCCTCGTCATGGAGTTCCTGGGGTTTAAGCTG
1 ATTGACATGCTCCGCTACTGCCCACAAGAGTGCCCCTCGTCATGGAGTTCCTGGGGTTTAAGCTG
5194 GAGTGGGGGACA
66 GAGTGGGGGACA
*
5206 ATTGACATGCTCCGCTACTGCCCACAAGTGTGCCCCTCGTCATGGAGTTCCTGGGGTTTAAGCTG
1 ATTGACATGCTCCGCTACTGCCCACAAGAGTGCCCCTCGTCATGGAGTTCCTGGGGTTTAAGCTG
5271 GAGTGGGGGACA
66 GAGTGGGGGACA
5283 AT
1 AT
5285 GATTTAAGCT
Statistics
Matches: 76, Mismatches: 3, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
77 76 1.00
ACGTcount: A:0.18, C:0.26, G:0.32, T:0.24
Consensus pattern (77 bp):
ATTGACATGCTCCGCTACTGCCCACAAGAGTGCCCCTCGTCATGGAGTTCCTGGGGTTTAAGCTG
GAGTGGGGGACA
Found at i:5296 original size:25 final size:25
Alignment explanation
Indices: 5262--5309 Score: 96
Period size: 25 Copynumber: 1.9 Consensus size: 25
5252 GTTCCTGGGG
5262 TTTAAGCTGGAGTGGGGGACAATGA
1 TTTAAGCTGGAGTGGGGGACAATGA
5287 TTTAAGCTGGAGTGGGGGACAAT
1 TTTAAGCTGGAGTGGGGGACAAT
5310 AAGCCCTTGG
Statistics
Matches: 23, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
25 23 1.00
ACGTcount: A:0.27, C:0.08, G:0.40, T:0.25
Consensus pattern (25 bp):
TTTAAGCTGGAGTGGGGGACAATGA
Done.