Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019204.1 Corchorus olitorius cultivar O-4 contig19237, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  64194

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2639--2783
31
4.7
31
75
1
121
21
17
22
38
1.93
9381--9487
54
2.0
54
98
0
205
34
17
10
37
1.84
25714--25948
115
2.0
117
95
1
420
40
12
17
29
1.86
37697--37725
15
1.9
15
100
0
58
27
20
17
34
1.95
46921--46956
2
18.0
2
100
0
72
0
50
0
50
1.00
58924--58959
17
2.1
17
90
10
56
2
2
11
83
0.86
62804--63274
238
2.0
237
86
2
651
34
16
18
30
1.93
63068--64174
335
3.4
322
75
13
968
34
16
16
31
1.92

Tables:   1

The End!