Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019209.1 Corchorus olitorius cultivar O-4 contig19242, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10754

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1002--2868
329
5.6
327
81
5
1709
35
16
15
33
1.90
2879--4416
329
4.6
327
79
6
1382
35
15
15
34
1.89
2886--4416
657
2.3
659
81
6
1737
35
15
15
34
1.89
4427--5080
332
2.0
331
83
3
832
35
15
16
32
1.90
4986--5225
125
1.9
125
100
0
480
33
16
24
25
1.96
4674--5548
457
1.9
458
81
4
1061
33
16
18
31
1.93
5111--6100
332
3.0
324
77
9
857
34
16
15
33
1.90
6111--7195
334
3.3
329
83
4
1311
35
16
15
32
1.91
7088--7282
108
1.8
107
80
3
239
35
19
16
27
1.94
7675--8770
328
3.3
319
81
8
1107
36
14
15
34
1.88
9106--9148
15
2.8
15
89
3
59
60
2
0
37
1.10
10701--10745
2
22.5
2
100
0
90
51
0
0
48
1.00

Tables:   1

The End!