Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019211.1 Corchorus olitorius cultivar O-4 contig19244, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4989

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
98--1525
652
2.2
646
91
2
1947
34
16
15
32
1.91
1039--2612
565
2.9
550
83
7
1733
36
16
13
33
1.87
2270--3264
329
3.1
323
82
6
1297
34
17
14
32
1.91
3630--4468
324
2.5
326
79
7
816
37
15
13
33
1.86
4614--4681
22
3.2
22
83
10
70
51
4
1
42
1.31
4631--4690
22
2.8
21
90
5
93
53
3
0
43
1.17
4652--4718
34
2.0
33
88
8
100
50
5
0
43
1.26
4695--4749
20
2.7
20
75
10
58
50
5
1
41
1.36
4736--4765
15
1.9
16
93
6
53
53
3
0
43
1.17
4622--4766
56
2.6
56
76
17
140
51
4
0
42
1.28

Tables:   1

The End!