Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019221.1 Corchorus olitorius cultivar O-4 contig19254, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  51069

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
19629--19653
2
12.5
2
100
0
50
52
0
0
48
1.00
22333--22366
15
2.2
16
94
5
61
38
0
23
38
1.55
27728--27761
3
10.7
3
87
12
50
0
32
0
67
0.91
27728--27760
7
5.0
7
92
7
52
0
30
0
69
0.88
31840--31874
3
11.0
3
88
11
52
65
0
34
0
0.93
31839--31874
10
3.7
10
88
3
56
66
0
33
0
0.92
31840--31875
13
2.8
13
95
0
63
63
0
36
0
0.94
34799--34827
15
1.9
15
100
0
58
20
10
62
6
1.50
43935--43964
14
2.1
14
100
0
60
26
6
23
43
1.78
49618--51053
332
4.3
331
81
6
1541
37
16
14
32
1.88

Tables:   1

The End!