Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019235.1 Corchorus olitorius cultivar O-4 contig19268, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  61389

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1478--1524
21
2.2
21
88
0
67
6
17
4
72
1.22
3029--3087
29
2.0
30
87
9
86
59
0
1
38
1.08
12902--12935
4
8.2
4
87
6
50
2
0
23
73
0.97
15055--15080
11
2.4
11
100
0
52
19
26
0
53
1.45
35991--36101
31
3.5
31
80
1
123
18
23
25
33
1.97
58103--58134
14
2.3
15
89
10
50
9
6
6
78
1.10

Tables:   1

The End!