Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019237.1 Corchorus olitorius cultivar O-4 contig19270, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11082

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
200--245
2
22.5
2
95
4
83
47
0
2
50
1.13
3642--3685
22
2.0
22
82
8
54
38
13
4
43
1.65
3683--3753
22
3.2
22
80
6
72
32
15
9
42
1.80
3945--4213
22
12.5
22
72
10
159
34
16
9
39
1.82
4294--4460
88
1.9
88
85
2
228
33
13
10
41
1.79
4293--4732
22
19.8
22
71
10
173
34
15
9
40
1.80
4614--4971
66
5.2
66
72
14
224
35
18
9
36
1.83
4764--4916
68
2.3
66
82
4
173
37
16
10
35
1.84
4750--4971
22
10.0
22
67
15
100
38
17
9
34
1.83
5186--5517
165
2.0
166
85
5
458
44
10
11
34
1.74
7362--7423
17
3.6
17
88
0
88
24
16
19
40
1.91
11011--11045
11
3.2
11
83
0
52
77
17
5
0
0.96

Tables:   1

The End!