Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019241.1 Corchorus olitorius cultivar O-4 contig19274, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  77402

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10909--10947
20
2.0
20
100
0
78
10
20
15
53
1.70
21151--21288
71
2.0
67
85
10
183
28
15
21
34
1.93
26262--26343
39
2.1
39
88
0
119
21
1
30
46
1.59
26518--26598
34
2.5
32
82
9
94
30
9
14
44
1.78
34220--34252
16
2.0
17
94
5
59
48
0
33
18
1.48
34198--34248
24
2.3
22
86
10
68
56
0
31
11
1.35
38401--38426
13
2.0
13
100
0
52
38
23
7
30
1.83
62598--62629
2
16.0
2
100
0
64
50
0
0
50
1.00

Tables:   1

The End!