Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019243.1 Corchorus olitorius cultivar O-4 contig19276, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21394

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
511--550
17
2.4
16
83
4
53
27
0
5
67
1.11
1439--4778
666
5.0
663
78
7
2862
34
15
15
34
1.89
1547--4778
334
9.7
330
78
6
2840
34
15
14
34
1.89
4908--4969
22
2.8
21
78
9
61
38
16
8
37
1.78
5315--5377
27
2.3
27
79
17
69
46
6
1
46
1.38
6005--6066
23
2.7
23
92
2
90
41
6
14
37
1.72
6015--6066
23
2.3
23
100
0
104
38
5
17
38
1.74
6102--6163
22
2.8
22
87
0
88
48
9
6
35
1.62
8957--9165
104
2.0
104
99
0
409
42
11
13
33
1.79
14345--15686
331
4.0
330
80
6
1457
36
14
14
34
1.87
16028--16070
15
2.8
15
89
3
59
60
2
0
37
1.10
16333--16492
80
2.0
81
92
1
268
37
14
18
29
1.90
18348--18394
25
1.9
24
91
4
76
29
4
8
57
1.48
18466--18877
206
2.0
201
94
2
716
36
11
8
43
1.71
19397--19466
36
1.9
36
88
0
104
58
8
10
22
1.57

Tables:   1

The End!