Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019245.1 Corchorus olitorius cultivar O-4 contig19278, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22982

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8549--8612
30
2.1
31
91
2
103
26
9
20
43
1.82
9180--9294
57
2.0
56
94
1
203
35
24
0
40
1.56
9359--9439
42
1.9
42
94
0
144
29
7
14
48
1.71
13509--13871
181
2.0
180
84
4
473
35
16
14
33
1.89
14622--14666
23
2.0
23
95
0
81
48
13
6
31
1.68
15260--15323
23
2.8
23
88
2
94
56
3
39
1
1.25
16015--16063
25
2.0
25
100
0
98
12
32
20
34
1.90
16527--16587
30
2.0
30
93
0
104
27
24
3
44
1.69
16805--16866
30
2.1
30
87
0
88
48
6
22
22
1.73

Tables:   1

The End!