Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019258.1 Corchorus olitorius cultivar O-4 contig19291, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  36932

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1865--1907
15
2.7
16
82
7
52
48
2
2
46
1.27
1865--1906
16
2.7
15
82
17
50
47
2
2
47
1.28
10898--11377
151
3.2
151
87
1
701
28
14
16
40
1.88
10801--11377
303
1.9
307
85
3
804
29
14
16
39
1.88
19682--19720
18
2.2
18
86
9
53
41
5
15
38
1.69
35161--35225
23
2.8
23
93
4
105
21
41
18
18
1.90
35328--35395
27
2.6
27
77
13
79
27
42
14
14
1.85
36069--36154
23
3.7
23
81
10
104
20
40
19
18
1.91
36240--36303
26
2.4
28
79
10
80
28
39
15
17
1.90

Tables:   1

The End!