Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019259.1 Corchorus olitorius cultivar O-4 contig19292, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19444

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
53--106
21
2.7
19
86
13
65
68
0
27
3
1.06
761--869
23
4.7
23
90
3
157
22
43
19
15
1.88
951--1018
27
2.6
27
77
13
79
27
42
14
14
1.85
3629--3658
15
2.0
15
93
0
51
60
3
30
6
1.39
6170--6260
45
2.0
45
84
0
119
38
18
14
28
1.90
14175--14209
2
17.0
2
94
5
61
48
0
2
48
1.16
15824--15857
2
17.5
2
93
6
61
47
0
0
52
1.00
16826--16881
24
2.2
24
81
6
67
46
33
8
10
1.70

Tables:   1

The End!