Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019262.1 Corchorus olitorius cultivar O-4 contig19295, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  31727

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3315--3444
36
3.6
35
85
8
163
30
20
33
16
1.94
3654--3687
12
2.8
12
86
0
50
17
47
2
32
1.63
5903--5958
24
2.3
24
96
0
103
23
41
28
7
1.80
6633--6753
35
3.6
34
87
4
118
22
28
26
22
1.99
6633--6752
33
3.5
33
88
5
159
22
28
26
22
1.99
8149--8182
14
2.2
16
90
10
54
64
5
11
17
1.45
12625--12662
4
9.2
4
88
5
58
0
23
0
76
0.79
19079--19118
7
5.7
7
100
0
80
12
27
0
60
1.33
28164--28200
3
12.7
3
94
5
67
0
35
0
64
0.94
28891--28921
3
10.0
3
93
6
53
64
0
35
0
0.94
31451--31493
2
21.5
2
100
0
86
48
0
51
0
1.00

Tables:   1

The End!