Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019268.1 Corchorus olitorius cultivar O-4 contig19301, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12948

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
308--829
287
1.8
288
85
4
748
35
17
14
32
1.90
536--7711
330
21.9
328
71
14
3439
35
17
14
32
1.90
3491--3524
2
17.0
2
100
0
68
50
0
0
50
1.00
4475--4545
8
8.9
8
92
0
115
50
0
7
42
1.29
4475--4545
24
3.0
24
100
0
142
50
0
7
42
1.29
6416--7711
328
4.0
326
79
8
1385
35
17
14
32
1.90
8741--8775
11
3.1
12
88
12
56
8
17
5
68
1.35
9403--10539
322
3.5
324
81
7
1328
35
17
14
32
1.90
10602--10645
18
2.5
17
89
7
70
40
6
6
45
1.57

Tables:   1

The End!