Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019271.1 Corchorus olitorius cultivar O-4 contig19304, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  53677

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
28709--28733
11
2.3
11
100
0
50
0
20
0
80
0.72
31917--31947
6
5.2
6
92
0
53
16
16
19
48
1.81
36901--36930
5
6.0
5
92
0
51
36
0
23
40
1.55
42494--42537
22
2.0
23
82
8
56
65
11
9
13
1.46
47067--47130
31
2.1
31
91
5
103
18
6
14
60
1.54
52434--52476
20
2.1
21
86
4
61
39
20
18
20
1.93
52930--52960
12
2.6
12
94
0
53
48
32
19
0
1.49

Tables:   1

The End!