Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019276.1 Corchorus olitorius cultivar O-4 contig19309, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  43137

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1335--1374
19
2.2
19
90
4
64
32
20
2
45
1.64
2205--2238
17
1.9
18
88
5
52
41
11
0
47
1.40
2645--2677
17
2.0
17
88
5
50
27
39
6
27
1.80
2972--3014
18
2.2
20
80
12
54
53
13
2
30
1.53
4261--4928
334
2.0
334
98
0
1282
27
23
17
31
1.97
13785--13849
32
2.0
33
85
14
91
55
10
20
13
1.68
17412--17451
15
2.6
16
92
4
64
12
10
12
65
1.49
23363--23402
15
2.6
16
92
4
64
12
10
12
65
1.49
24211--24245
18
2.0
17
88
5
52
48
14
5
31
1.67
26446--26511
19
3.9
18
67
30
56
30
21
7
40
1.81
26446--26523
30
2.6
30
95
2
140
32
20
7
39
1.81
26455--26523
11
6.9
10
71
22
56
33
20
7
39
1.80
31583--31618
18
2.0
18
88
0
54
44
19
13
22
1.86
32869--32902
17
2.0
17
88
0
50
44
5
11
38
1.65
40654--40689
19
1.9
18
88
5
54
41
8
22
27
1.82

Tables:   1

The End!