Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019282.1 Corchorus olitorius cultivar O-4 contig19315, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  28742

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
439--470
2
16.0
2
100
0
64
50
0
0
50
1.00
2454--2510
27
2.1
27
96
0
105
35
7
36
21
1.80
3121--3207
45
1.9
45
86
4
122
48
11
4
35
1.60
6800--6850
22
2.3
23
80
16
63
41
1
3
52
1.31
6815--6853
13
3.2
12
86
10
53
48
0
2
48
1.15
8425--8450
3
8.7
3
100
0
52
65
0
0
34
0.93
12834--13693
434
2.0
435
81
5
1018
43
12
14
29
1.82
14483--14544
30
2.1
30
93
0
106
43
4
24
27
1.74
17153--17186
3
11.3
3
93
0
59
2
32
0
64
1.08
17770--17803
15
2.3
15
89
0
50
35
17
20
26
1.95

Tables:   1

The End!