Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019290.1 Corchorus olitorius cultivar O-4 contig19323, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14527

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2520--2546
9
3.0
9
100
0
54
0
0
22
77
0.76
7684--8070
70
5.4
71
75
12
297
18
21
18
41
1.91
7684--8019
35
9.3
36
80
10
258
19
21
17
41
1.90
7840--8020
73
2.4
74
88
9
253
18
22
16
42
1.89
8888--8962
21
3.6
21
94
0
123
26
26
18
28
1.98
10953--10999
26
1.9
23
87
12
67
40
4
27
27
1.75
11875--11966
21
4.4
21
86
2
123
26
25
20
28
1.99
12088--12744
36
18.5
36
81
5
615
18
20
18
43
1.89
12208--12418
73
2.9
74
78
17
198
17
19
17
45
1.86
12217--12483
102
2.5
102
81
8
236
16
21
19
42
1.89
12075--12744
71
9.5
71
77
7
545
18
20
18
42
1.89
12928--13037
30
3.7
30
90
0
166
20
13
15
50
1.78
12928--13052
60
2.1
60
83
0
160
22
13
14
49
1.78
13830--13867
16
2.3
17
90
4
60
68
7
13
10
1.39

Tables:   1

The End!