Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019293.1 Corchorus olitorius cultivar O-4 contig19326, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12094

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4269--4355
44
2.0
44
90
0
138
28
22
21
26
1.99
4481--4525
22
2.0
22
95
0
81
35
44
6
13
1.70
5805--5893
44
2.0
44
91
0
142
29
24
20
25
1.99
9211--9315
16
6.6
16
76
8
106
9
13
37
40
1.77
9211--9315
32
3.3
32
89
0
156
9
13
37
40
1.77
9305--9352
23
2.1
23
88
0
69
4
18
45
31
1.68
9776--9847
31
2.3
31
75
17
78
61
8
4
26
1.43

Tables:   1

The End!