Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019296.1 Corchorus olitorius cultivar O-4 contig19329, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10232

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
769--848
25
3.2
25
64
13
65
38
17
12
31
1.87
751--891
50
2.8
50
91
0
210
33
19
14
32
1.92
1148--1646
68
7.3
68
88
4
643
26
28
18
26
1.98
1148--1646
69
7.3
69
90
1
702
26
28
18
26
1.98
1148--1646
136
3.6
137
89
3
718
26
28
18
26
1.98
2612--2652
2
20.5
2
100
0
82
48
0
0
51
1.00
2652--2676
2
12.5
2
100
0
50
0
0
48
52
1.00
4557--4648
21
4.4
21
95
2
159
26
27
18
28
1.98

Tables:   1

The End!